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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905511.1_cds_XP_016455766.1_49667
CDS Infomation

[gene=LOC107779794] [db_xref=GeneID:107779794] [protein=calreticulin-3-like isoform X2] [protein_id=XP_016455766.1] [location=join(107237..107240,107357..107464,108838..109030,109737..109995,110258..110314,110400..110447,111142..111228,111306..111363,111474..111541,111649..111741,111830..111886,111970..112050,112546..112578,113453..113464)] [gbkey=CDS]
Sequence

ATGTATGGATGGAGGAGCAAATGGGTGAAGTCAGACTGGAAAATCAGTGAAGGAAAATCA
GGTTCATTTAAGCACACGGCCGGCACATGGGCTGGTGATCCTGATGACAAAGGTATCCAG
ACAACAAACGATGCCAAACATTTCGCGGTCTCTGCAAAGATACCGGAATTTAGCAATAAA
AACAGAACACTGGTTGTACAGTATTCTATAAAGTTTGAGCAAGATATTGAATGTGGAGGG
GGTTATATAAAGCTTCTCTCTGGATATGTCAATCAGAAGAAATTTGGGGGAGACACCCCA
TACAGTTTTATGTTTGGGCCAGATATCTGTGGTACACAGACGAAGAAACTTCATGTTATA
CTTTCCTACCAAGGCCAGAATTACCCCATCAAGAAGGAATTAGAATGTGAAACAGACAAA
TTAACACATTTCTACACGTTCATTCTTAGACCTGATGCATCCTACAGCATCTGGATTGAT
GGTCGAGAAAGAGATTCTGGAAGTATGTACACAGACTGGGACATACTTCCTCCCCGCAAA
ATCAAGGATGTAAATGCAAAAAAGCCTGCAGACTGGGAAGACAGAGAATATATTGAAGAT
CCAGATGACATCAAACCTGAGGGATATGATTCTATTCCGAGAGAGATTCCAGACCGGAAA
GCTAAAAAGCCAAATAACTGGGATGATGAAGAGGATGGTATGTGGAAGCCACCCAAAGTA
CCTAATCCAGCATACCGTGGTCCATGGAAAAGGAAGAAAATTAAGAATCCCAACTATAAA
GGAAAATGGAAGATTCCTTGGATTGATAATCCAGAATTTGAAGATGACCCTGATCTCTAC
GTACTGAAGCCGATCAAATATGTTGGTATCGAAGTTTGGCAGGTAAAGGCAGGTTCTGTT
TTTGATAACATTTTGGTGTGTGATGAGCCAGATTATGCAAAACAAGTGATTCAGGAAGTG
TTTGCCAATAGGGAGGCTGAAAAGGAGGCTTTTGAAGAGGCAGAGAAAGTGAGAAAAGCA
AGAGAAGAAGAGGAAGCTCAAAGAGCAAGAGAGGAAGGTGAAAGGAGGAGACGAGAAAGG
GGTCGGGACCGACAACGGGACAGATACAAGAGGCGCTATCACCACGATTATATGGATGAC
TATCATGATGAACTTTAA

Peptide Sequence

PEP ID

XP_016455766.1
PEP Infomation

PREDICTED: calreticulin-3-like isoform X2 [Nicotiana tabacum]
Sequence

MYGWRSKWVKSDWKISEGKSGSFKHTAGTWAGDPDDKGIQTTNDAKHFAVSAKIPEFSNK
NRTLVVQYSIKFEQDIECGGGYIKLLSGYVNQKKFGGDTPYSFMFGPDICGTQTKKLHVI
LSYQGQNYPIKKELECETDKLTHFYTFILRPDASYSIWIDGRERDSGSMYTDWDILPPRK
IKDVNAKKPADWEDREYIEDPDDIKPEGYDSIPREIPDRKAKKPNNWDDEEDGMWKPPKV
PNPAYRGPWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSV
FDNILVCDEPDYAKQVIQEVFANREAEKEAFEEAEKVRKAREEEEAQRAREEGERRRRER
GRDRQRDRYKRRYHHDYMDDYHDEL

Transcript Sequence

Gene sequence data has not been registered.